BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB033C06SP1|AL429711
(910 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1737 823 0.0
3x_Contig768 476 e-134
>3x_Contig1737
Length = 17214
Score = 823 bits (415), Expect = 0.0
Identities = 415/415 (100%)
Strand = Plus / Plus
Query: 1 atcatcaagcttggaagtgaaatagaaggcataaagaattcaagatctaggctttgcaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16798 atcatcaagcttggaagtgaaatagaaggcataaagaattcaagatctaggctttgcaca 16857
Query: 61 agatcgtcatcatcgttgtgaaaaccaccgatccgctggctgccggcgatactatcgtcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16858 agatcgtcatcatcgttgtgaaaaccaccgatccgctggctgccggcgatactatcgtcc 16917
Query: 121 aattcatccttggacccatcgaacagagacagagaaagaggagacagtggtgtggacgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16918 aattcatccttggacccatcgaacagagacagagaaagaggagacagtggtgtggacgaa 16977
Query: 181 acaagagccatattgacccgctgtggagaattaccctcttcctccactctctctatctca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16978 acaagagccatattgacccgctgtggagaattaccctcttcctccactctctctatctca 17037
Query: 241 atcacaggctccgataaaggcggtttctccagctcctgcaccagctcttgtagctgcttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17038 atcacaggctccgataaaggcggtttctccagctcctgcaccagctcttgtagctgcttc 17097
Query: 301 tcctgaactggttcctcctcctttaccaccacagttttcttggttatcatcttcttgttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17098 tcctgaactggttcctcctcctttaccaccacagttttcttggttatcatcttcttgttc 17157
Query: 361 ttcttgactttggtggcctgtttcccagtggcagcgttcaaatccaccgcacata 415
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17158 ttcttgactttggtggcctgtttcccagtggcagcgttcaaatccaccgcacata 17212
>3x_Contig768
Length = 2062
Score = 476 bits (240), Expect = e-134
Identities = 240/240 (100%)
Strand = Plus / Plus
Query: 671 ggcaataatcaatggctgaatacaggacacggtctttaccactttaccctttgtcttatt 730
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggcaataatcaatggctgaatacaggacacggtctttaccactttaccctttgtcttatt 60
Query: 731 ggtattgtagaagaaatgatgattcatttcaaagcttttcctttaaaataatgactatag 790
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggtattgtagaagaaatgatgattcatttcaaagcttttcctttaaaataatgactatag 120
Query: 791 ataaggaaataatgaagctttaaagagagaacagtttataagagggaatagagaaactat 850
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ataaggaaataatgaagctttaaagagagaacagtttataagagggaatagagaaactat 180
Query: 851 ttgagctacctgatccgtgctacatagttgctagtgacacataatcacggtaggttgtat 910
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttgagctacctgatccgtgctacatagttgctagtgacacataatcacggtaggttgtat 240
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7567
Number of Sequences: 1807
Number of extensions: 7567
Number of successful extensions: 65
Number of sequences better than 1.0e-20: 2
length of query: 910
length of database: 10,358,551
effective HSP length: 16
effective length of query: 894
effective length of database: 10,329,639
effective search space: 9234697266
effective search space used: 9234697266
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)